AMICI

About

  • About AMICI
  • Availability
  • License conditions
  • How to cite AMICI
  • References
  • Background
  • Changelog
  • Versioning policy
  • Glossary
  • Contributing

Python

  • Installation
  • Examples
  • Usage
  • Caveats
  • FAQ
  • API reference

C++

  • Installation
  • Usage
  • API reference

Developer's guide

  • AMICI developer’s guide
  • Handling of Discontinuities
AMICI
  • Overview: module code

All modules for which code is available

  • amici
    • amici._installation.amici
    • amici.adapters.fiddy
    • amici.importers.antimony
    • amici.importers.bngl
    • amici.importers.petab._petab_importer
    • amici.importers.petab.v1._petab_import
    • amici.importers.pysb
    • amici.importers.sbml
      • amici.importers.sbml.splines
    • amici.importers.utils
    • amici.sim.jax.model
    • amici.sim.jax.petab
    • amici.sim.sundials
      • amici.sim.sundials._debugging
      • amici.sim.sundials._numpy
      • amici.sim.sundials._swig_wrappers
      • amici.sim.sundials.gradient_check
      • amici.sim.sundials.petab._v2
      • amici.sim.sundials.petab.v1._conditions
      • amici.sim.sundials.petab.v1._petab_problem
      • amici.sim.sundials.petab.v1._simulations
      • amici.sim.sundials.petab.v1._simulator
      • amici.sim.sundials.plotting

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